rfmm_85669.1

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Basic information about the TSS


TSS ID:rfmm_85669.1
Species:mouse
Chr:chr9
Start:37450562
End:37450575
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2944578,EM10E1215985)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000002008.7:-11
GeneID:57276
HGNC/MGI_ID:MGI:1928009
UniProt_ID:Q9Z109
Nearer transcript ids and distances:
  • ENSMUST00000215957.2:12
  • BC099457:12
  • ENSMUST00000215271.2:15
  • AK008920:15
  • AK004478:15
view more...
Gene_name:V-set and immunoglobulin domain containing 2
Gene_symbol:Vsig2
Gene_synonyms:1190004B15Rik 2210413P10Rik CTM CTX
Gene_source:MGI:1928009



TATA-Box annotation


Distance to TSS:17
Nearest PromoterID:NM_020518.2
Entrez ID:Vsig2
Nearest Unigene:NM_020518
Nearest Refseq:
Nearest Ensembl:
Gene Name:V-set and immunoglobulin domain containing 2
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.