rfmm_87846.1

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Basic information about the TSS


TSS ID:rfmm_87846.1
Species:mouse
Chr:chr9
Start:58395367
End:58395393
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2952986,EM10E1219785)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF202902:0
MA438479:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000085658.5:493
  • NM_176921.4:493
  • AK031382:493
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-506
Nearest PromoterID:NM_176921.4
Entrez ID:Insyn1
Nearest Unigene:NM_176921
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.115385
GC%:0.814815
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):