rfmm_882.1

Basic information about the TSS

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TSS ID: rfmm_882.1 TSS ID(Version3): mm_5424.1 Species: mouse Chr: chr1		Start: 34478400 End: 34478460 Strand: -
Source datasets	FANTOM5|DRA000914|PRJDB10397|GSE117655
Protocol	CAGE|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*	4

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	pELS,CTCF-bound (EM10D2267113,EM10E0933692)
Category:	pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: AK010002:0 AK154179:0 GeneID: 69668 HGNC/MGI_ID: MGI:1916918 UniProt_ID: Q9D6T3 Nearer transcript ids and distances: AK162237:35 ENSMUST00000042493.10:-293 NM_027159.2:-293 BC019430:-293 view more...

Gene_name: coiled-coil domain containing 115 Gene_symbol: Ccdc115 Gene_synonyms: 2310061I09Rik Ccp1 Gene_source: MGI:1916918

TATA-Box annotation

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Distance to TSS:	-128
Nearest PromoterID:	XM_036165638.1
Entrez ID:	Imp4
Nearest Unigene:	XM_036165638
Nearest Refseq:
Nearest Ensembl:
Gene Name:	coiled-coil domain containing 115
Gene Alias:
Gene Type:
CpG%:	0.100000
GC%:	0.721311
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.