rfmm_88485.1

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Basic information about the TSS


TSS ID:rfmm_88485.1
Species:mouse
Chr:chr9
Start:65437064
End:65437110
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2200698,EM10E0909838)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000216282.2:0
AK152566:0
AK153351:0
GeneID:434410
HGNC/MGI_ID:MGI:5009827
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 17749
    Gene_symbol:Gm17749
    Gene_synonyms:
    Gene_source:MGI:5009827



    TATA-Box annotation


    Distance to TSS:-9396
    Nearest PromoterID:XM_036155086.1
    Entrez ID:Ankdd1a
    Nearest Unigene:XM_017313713
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 17749
    Gene Alias:
    Gene Type:
    CpG%:0.043478
    GC%:0.617021
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.