rfmm_89176.1

Basic information about the TSS

TSS ID:	rfmm_89176.1
Species:	mouse
Chr:	chr9

Start:	72832905
End:	72832953
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2959890,EM10E1223000)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000038489.6:0 AK011208:0
GeneID:	72135
HGNC/MGI_ID:	MGI:1919385
UniProt_ID:	Q1JPR5 Q9D0P5
Nearer transcript ids and distances:	LF308243:111 MA543820:111 BC116630:142 BC116631:142 LF308244:474 MA543821:474 LF202910:-475 MA438487:-475 view more...

Gene_name:	pygopus 1
Gene_symbol:	Pygo1
Gene_synonyms:	2600014C22Rik
Gene_source:	MGI:1919385

TATA-Box annotation

Distance to TSS:	2
Nearest PromoterID:	NM_028116.3
Entrez ID:	Pygo1
Nearest Unigene:	NM_028116
Nearest Refseq:
Nearest Ensembl:
Gene Name:	pygopus 1
Gene Alias:
Gene Type:
CpG%:	0.187500
GC%:	0.918367
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.