rfmm_90306.1

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Basic information about the TSS


TSS ID:rfmm_90306.1
Species:mouse
Chr:chr9
Start:96587858
End:96587888
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2215943,EM10E0915739)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000186821.2:0
AK044309:0
GeneID:442826
HGNC/MGI_ID:MGI:3045290
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA A930006L05 gene
    Gene_symbol:A930006L05Rik
    Gene_synonyms:
    Gene_source:MGI:3045290



    TATA-Box annotation


    Distance to TSS:-6384
    Nearest PromoterID:XM_006511193.5
    Entrez ID:Zbtb38
    Nearest Unigene:XM_006511193
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA A930006L05 gene
    Gene Alias:
    Gene Type:
    CpG%:0.033333
    GC%:0.580645
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.