rfmm_90721.1

Basic information about the TSS

TSS ID:	rfmm_90721.1
Species:	mouse
Chr:	chr9

Start:	103182356
End:	103182454
Strand:	+

Source datasets

GSE117655|DRA000914

Protocol

deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2968076,EM10E1226010)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000035164.10:0 ENSMUST00000189631.2:0 AK085031:0 AK129104:0 AK084654:0 AK084869:0
GeneID:	235559
HGNC/MGI_ID:	MGI:1920018
UniProt_ID:	Q6ZQF0
Nearer transcript ids and distances:	NM_176979.5:72 BC049797:72 ENSMUST00000187065.2:248 view more...

Gene_name:	topoisomerase (DNA) II binding protein 1
Gene_symbol:	Topbp1
Gene_synonyms:	1110031N14Rik 2810429C13Rik D430026L04Rik
Gene_source:	MGI:1920018

TATA-Box annotation

Distance to TSS:	54
Nearest PromoterID:	XM_006511706.5
Entrez ID:	Topbp1
Nearest Unigene:	XM_006511707
Nearest Refseq:
Nearest Ensembl:
Gene Name:	topoisomerase (DNA) II binding protein 1
Gene Alias:
Gene Type:
CpG%:	0.122449
GC%:	0.646465
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.