rfmm_91280.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_91280.1
Species:mouse
Chr:chr9
Start:107838704
End:107838706
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS (EM10D2222803,EM10E0918654)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB348664:60
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB348665:76
  • AB348666:86
  • AB348667:92
  • AB348668:112
  • LF309438:-135
  • MA545015:-135
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:4820
Nearest PromoterID:XM_017313284.2
Entrez ID:Traip
Nearest Unigene:XM_006511693
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):