rfmm_91481.1

Basic information about the TSS

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TSS ID: rfmm_91481.1 Species: mouse Chr: chr9		Start: 108685556 End: 108685640 Strand: +
Source datasets	FANTOM5|EPD|DRA000914
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2970612,EM10E1227290)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000035218.9:0 ENSMUST00000195323.2:0 ENSMUST00000194819.2:0 BC064818:0 AK134725:0 GeneID: 80987 HGNC/MGI_ID: MGI:1931834 UniProt_ID: A0A0A6YWU4 A0A0A6YWW3 Q9ESJ4 Nearer transcript ids and distances: AF130313:43

Gene_name: NCK interacting protein with SH3 domain Gene_symbol: Nckipsd Gene_synonyms: AF3P21 DIP1 ORF1 SPIN90 WISH Wasbp Gene_source: MGI:1931834

TATA-Box annotation

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Distance to TSS:	19
Nearest PromoterID:	NM_030729.4
Entrez ID:	Nckipsd
Nearest Unigene:	XM_006511860
Nearest Refseq:
Nearest Ensembl:
Gene Name:	NCK interacting protein with SH3 domain
Gene Alias:
Gene Type:
CpG%:	0.178571
GC%:	0.800000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.