rfmm_93751.1

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Basic information about the TSS


TSS ID:rfmm_93751.1
Species:mouse
Chr:chr10
Start:17598969
End:17598977
Strand:+
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2314123,EM10E0953030)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK131664:0
AK133791:0
GeneID:17684
HGNC/MGI_ID:MGI:1306784
UniProt_ID:
Nearer transcript ids and distances:
  • LF197928:-1
  • MA433505:-1
  • ENSMUST00000038107.9:-3
  • ENSMUST00000219558.2:4
  • ENSMUST00000218370.2:13
  • BC057126:17
  • U86445:18
  • Y15163:18
  • LF221492:25
  • MA457069:25
  • AK177398:122
  • AK183582:192
  • AK187598:192
  • AK196895:192
view more...
Gene_name:Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
Gene_symbol:Cited2
Gene_synonyms:Mrg1 Msg2 p35srj
Gene_source:MGI:1306784



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NM_010828.3
Entrez ID:Cited2
Nearest Unigene:XM_036155664
Nearest Refseq:
Nearest Ensembl:
Gene Name:Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.