rfmm_96350.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_96350.1
Species:mouse
Chr:chr10
Start:63079915
End:63079949
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2326160,EM10E0957886)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000054837.5:0
AK018869:0
AK006818:0
AK018967:0
GeneID:641387
HGNC/MGI_ID:MGI:3604190
UniProt_ID:Q9CU07
Nearer transcript ids and distances:
  • LF222807:101
  • MA458384:101
view more...
Gene_name:RIKEN cDNA 1700120B22 gene
Gene_symbol:1700120B22Rik
Gene_synonyms:
Gene_source:MGI:3604190



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NR_166111.1
Entrez ID:1700120B22Rik
Nearest Unigene:NR_166111
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700120B22 gene
Gene Alias:
Gene Type:
CpG%:0.029412
GC%:0.657143
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.