rfmm_9725.1

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Basic information about the TSS


TSS ID:rfmm_9725.1
Species:mouse
Chr:chr1
Start:173769744
End:173769748
Strand:-
Source datasetsDRA000914
ProtocolCAGE_and_CAGEscan
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D1117006,EM10E0460541)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK172303:0
GeneID:15950
HGNC/MGI_ID:MGI:96428
UniProt_ID:
Nearer transcript ids and distances:
  • AK172505:-19
  • AF022371:-210
  • BC008167:-255
  • ENSMUST00000140143.2:-272
  • AK164695:-272
  • ENSMUST00000042228.15:-278
  • ENSMUST00000081216.12:-278
  • ENSMUST00000128430.8:-278
  • AK161531:-278
  • ENSMUST00000138143.8:-298
  • AK041232:-298
  • AK169754:-303
  • ENSMUST00000129829.8:-309
  • ENSMUST00000135331.8:-309
  • AK137616:-309
  • ENSMUST00000123708.8:-310
  • NM_001302649.1:-310
  • NM_001302651.1:-310
  • AK040214:-310
  • ENSMUST00000156895.8:-490
  • NM_001302650.1:-490
  • AK144663:-490
view more...
Gene_name:interferon activated gene 203
Gene_symbol:Ifi203
Gene_synonyms:
Gene_source:MGI:96428



TATA-Box annotation


Distance to TSS:283
Nearest PromoterID:XM_006496669.4
Entrez ID:Ifi203
Nearest Unigene:XM_036162001
Nearest Refseq:
Nearest Ensembl:
Gene Name:interferon activated gene 203
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "AK172505:-19 AF022371:-210 BC008167:-255 ENSMUST00000140143.2:-272 AK164695:-272 ENSMUST00000042228.15:-278 ENSMUST00000081216.12:-278 ENSMUST00000128430.8:-278 AK161531:-278 ENSMUST00000138143.8:-298 AK041232:-298 AK169754:-303 ENSMUST00000129829.8:-309 ENSMUST00000135331.8:-309 AK137616:-309 ENSMUST00000123708.8:-310 NM_001302649.1:-310 NM_001302651.1:-310 AK040214:-310 ENSMUST00000156895.8:-490 NM_001302650.1:-490 AK144663:-490" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.