rfmm_97866.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_97866.1
Species:mouse
Chr:chr10
Start:80633788
End:80633801
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2332108,EM10E0960682)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF198129:64
MA433706:64
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000148665.8:231
  • LF223601:265
  • MA459178:265
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:295
Nearest PromoterID:XM_017314165.1
Entrez ID:Plekhj1
Nearest Unigene:XM_006514326
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.076923
GC%:0.642857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):