rfmm_98298.1

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Basic information about the TSS


TSS ID:rfmm_98298.1
Species:mouse
Chr:chr10
Start:82648034
End:82648043
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2333000,EM10E0961214)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000178540.8:-77
ENSMUST00000076984.8:-77
AK006461:-77
GeneID:70003
HGNC/MGI_ID:MGI:1917253
UniProt_ID:Q8CF33
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 1700028I16 gene
    Gene_symbol:1700028I16Rik
    Gene_synonyms:
    Gene_source:MGI:1917253



    TATA-Box annotation


    Distance to TSS:81
    Nearest PromoterID:NR_038042.1
    Entrez ID:1700028I16Rik
    Nearest Unigene:NR_038042
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 1700028I16 gene
    Gene Alias:
    Gene Type:
    CpG%:0.111111
    GC%:0.800000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.