rfmm_98304.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_98304.1
Species:mouse
Chr:chr10
Start:82694888
End:82694965
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2333027,EM10E0961226)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KY467549:3
GeneID:102641476
HGNC/MGI_ID:MGI:5621445
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000220169.2:46
  • NR_156010.1:46
view more...
Gene_name:predicted gene, 38560
Gene_symbol:Gm38560
Gene_synonyms:
Gene_source:MGI:5621445



TATA-Box annotation


Distance to TSS:-84
Nearest PromoterID:NR_156010.1
Entrez ID:Gm38560
Nearest Unigene:NR_156010
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene, 38560
Gene Alias:
Gene Type:
CpG%:0.064935
GC%:0.589744
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.