rfmm_992.1

Basic information about the TSS

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TSS ID: rfmm_992.1 Species: mouse Chr: chr1		Start: 36586276 End: 36586314 Strand: -
Source datasets	FANTOM5|EPD|DRA000914
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D1047832,EM10E0434398)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000207843.2:0 ENSMUST00000194894.4:0 ENSMUST00000208690.2:0 ENSMUST00000208269.2:0 AK030874:0 AK018681:0 AK042896:0 AK158215:0 AK081207:0 AK160231:0 BC117004:0 BC119100:0 BC144893:0 GeneID: 109346 HGNC/MGI_ID: MGI:1914816 UniProt_ID: A0A0A6YWV1 A0A140LJ63 Nearer transcript ids and distances: NM_001310533.1:-19 NM_026241.4:-19 NR_132321.1:-19 AK177190:69 ENSMUST00000001172.12:-212 view more...

Gene_name: ankyrin repeat domain 39 Gene_symbol: Ankrd39 Gene_synonyms: 9130416N05Rik C030004B10Rik Gene_source: MGI:1914816

TATA-Box annotation

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Distance to TSS:	38
Nearest PromoterID:	NM_026241.4
Entrez ID:	Ankrd39
Nearest Unigene:	NM_026241
Nearest Refseq:
Nearest Ensembl:
Gene Name:	ankyrin repeat domain 39
Gene Alias:
Gene Type:
CpG%:	0.078947
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.