rfmm_99641.1

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Basic information about the TSS


TSS ID:rfmm_99641.1
Species:mouse
Chr:chr10
Start:105410400
End:105410427
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2339780,EM10E0963903)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000145794.3:0
AK034146:0
GeneID:327812
HGNC/MGI_ID:MGI:3783105
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene 15663
    Gene_symbol:Gm15663
    Gene_synonyms:
    Gene_source:MGI:3783105



    TATA-Box annotation


    Distance to TSS:1
    Nearest PromoterID:NR_038032.1
    Entrez ID:Gm15663
    Nearest Unigene:NR_038032
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene 15663
    Gene Alias:
    Gene Type:
    CpG%:0.037037
    GC%:0.642857
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.