rfhg_161872.1

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Basic information about the TSS


TSS ID:rfhg_161872.1
Species:human
Chr:chr13
Start:94712710
End:94712724
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2679978,EH38E1689656)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENST00000438290.2 AK055459
Distance:0
GeneID:100507533
HGNC/MGI_ID:HGNC:39807
UniProt_ID:
Gene_name:SOX21-AS1
Gene_symbol:SOX21-AS1
Gene_synonyms:
Gene_source:HGNC:39807



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NR_046514
Entrez ID:100507533
Nearest Unigene:Hs.556071
Nearest Refseq:NR_046514
Nearest Ensembl:ENSG00000227640
Gene Name:SOX21-AS1
Gene Alias:-
Gene Description:SOX21 antisense divergent transcript 1
Gene Type:ncRNA
CpG%:0.000000
GC%:0.533333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.