rfmm_1192.1

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Basic information about the TSS


TSS ID:rfmm_1192.1
Species:mouse
Chr:chr1
Start:38666620
End:38666630
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2268748,EM10E0934432)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001290814.1:295
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000238906.2:338
  • ENSMUST00000095027.9:354
  • U34361:361
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-300
Nearest PromoterID:NM_001290814.1
Entrez ID:Aff3
Nearest Unigene:XM_011238446
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.200000
GC%:0.818182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):