rfmm_123085.1

Basic information about the TSS

---

TSS ID: rfmm_123085.1 Species: mouse Chr: chr13		Start: 38221212 End: 38221286 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

---

Description:	PLS,CTCF-bound (EM10D2433454,EM10E1004760)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENSMUST00000223910.2:0 ENSMUST00000225954.2:0 ENSMUST00000226006.2:0 ENSMUST00000224477.2:0 AK152707:0 BC006884:0 AK017312:0 GeneID: 71340 HGNC/MGI_ID: MGI:1918590 UniProt_ID: A0A286YCL3 Nearer transcript ids and distances: ENSMUST00000223656.2:-218 AK161315:-218 ENSMUST00000021866.10:-241 NM_024242.3:-247 view more...

Gene_name: RIO kinase 1 Gene_symbol: Riok1 Gene_synonyms: 3110046C13Rik 5430416A05Rik Gene_source: MGI:1918590

TATA-Box annotation

---

Distance to TSS:	34
Nearest PromoterID:	XM_017315606.2
Entrez ID:	Riok1
Nearest Unigene:	XR_001780817
Nearest Refseq:
Nearest Ensembl:
Gene Name:	RIO kinase 1
Gene Alias:
Gene Type:
CpG%:	0.081081
GC%:	0.613333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.