rfmm_123135.1

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Basic information about the TSS


TSS ID:rfmm_123135.1
Species:mouse
Chr:chr13
Start:38842968
End:38843014
Strand:-
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2433720,EM10E1004867)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000224487.2:0
BC048466:0
AK009889:0
AK003335:0
AK160723:0
GeneID:66143
HGNC/MGI_ID:MGI:1913393
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000001757.9:-20
  • ENSMUST00000223823.2:37
view more...
Gene_name:eukaryotic translation elongation factor 1 epsilon 1
Gene_symbol:Eef1e1
Gene_synonyms:1110003A02Rik AIMP3
Gene_source:MGI:1913393



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NM_025380.2
Entrez ID:Eef1e1
Nearest Unigene:NM_025380
Nearest Refseq:
Nearest Ensembl:
Gene Name:eukaryotic translation elongation factor 1 epsilon 1
Gene Alias:
Gene Type:
CpG%:0.021739
GC%:0.659574
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.