rfmm_123158.1

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Basic information about the TSS


TSS ID:rfmm_123158.1
Species:mouse
Chr:chr13
Start:40884227
End:40884238
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2434202,EM10E1004964)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001122948.2:294
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000021787.7:308
  • AK053704:308
  • U17287:330
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-299
Nearest PromoterID:NM_001122948.2
Entrez ID:Tfap2a
Nearest Unigene:NM_001122948
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.416667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):