rfmm_123359.1

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Basic information about the TSS


TSS ID:rfmm_123359.1
Species:mouse
Chr:chr13
Start:43276302
End:43276306
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1351685,EM10E0558090)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001005748.2:9
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000136576.8:27
  • AK166463:27
  • ENSMUST00000138640.8:42
  • BC025873:46
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-11
Nearest PromoterID:NM_001005748.2
Entrez ID:Phactr1
Nearest Unigene:XM_011244395
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.200000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):