rfmm_123949.1

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Basic information about the TSS


TSS ID:rfmm_123949.1
Species:mouse
Chr:chr13
Start:51799773
End:51799783
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2438518,EM10E1006822)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK089504:-36
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK077690:-278
  • BC094919:-381
  • AK002451:-412
  • AK004163:-412
  • BC022647:-412
  • AK166688:-421
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:510
Nearest PromoterID:NM_025415.3
Entrez ID:Cks2
Nearest Unigene:NM_025415
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.100000
GC%:0.727273
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):