rfmm_123967.1

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Basic information about the TSS


TSS ID:rfmm_123967.1
Species:mouse
Chr:chr13
Start:51888681
End:51888703
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1357616,EM10E0560769)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF236513:0
MA472090:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK150911:-50
  • ENSMUST00000110039.2:-96
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:63
Nearest PromoterID:XR_004937998.1
Entrez ID:Sema4d
Nearest Unigene:NM_001378324
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.391304
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):