rfmm_124170.1

Basic information about the TSS

TSS ID:	rfmm_124170.1
Species:	mouse
Chr:	chr13

Start:	54713182
End:	54713199
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2439905,EM10E1007451)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_133797.4:0 NM_001252645.1:0 NM_001252646.1:0 NM_001252647.1:0 NM_001252648.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	BC033445:8 ENSMUST00000132136.3:13 AK145025:21 AK169399:21 ENSMUST00000147318.2:25 AK159945:27 AK004845:29 ENSMUST00000150938.8:31 BC043040:31 ENSMUST00000153708.2:36 ENSMUST00000143144.8:39 BC054417:42 ENSMUST00000126295.2:44 AK167616:44 AK177839:47 AK187382:47 AK210951:47 AK211316:47 AK217400:47 ENSMUST00000026989.15:-49 AK016176:51 AK028697:55 AK014792:55 ENSMUST00000153065.8:66 BC039775:72 AK173126:74 ENSMUST00000143173.8:78 AK217762:177 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	5
Nearest PromoterID:	NM_001252647.1
Entrez ID:	4833439L19Rik
Nearest Unigene:	NM_133797
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.117647
GC%:	0.611111
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):