rfmm_124272.1

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Basic information about the TSS


TSS ID:rfmm_124272.1
Species:mouse
Chr:chr13
Start:55253104
End:55253153
Strand:+
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2440198,EM10E1007606)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000161018.8:0
ENSMUST00000161315.8:0
ENSMUST00000021937.12:0
ENSMUST00000159278.8:0
ENSMUST00000161551.8:0
ENSMUST00000159147.8:0
ENSMUST00000162476.8:0
ENSMUST00000160660.8:0
ENSMUST00000162428.8:0
AF083339:0
BC055075:0
GeneID:26919
HGNC/MGI_ID:MGI:1349417
UniProt_ID:E0CY94 E0CYH6 E0CYN4 E0CZ32 E9PYN2 E9Q7N8 Q9R0B7
Nearer transcript ids and distances:
  • ENSMUST00000161077.2:59
  • LF236655:126
  • MA472232:126
  • AK178507:161
  • AK197315:161
view more...
Gene_name:zinc finger protein 346
Gene_symbol:Zfp346
Gene_synonyms:
Gene_source:MGI:1349417



TATA-Box annotation


Distance to TSS:6
Nearest PromoterID:NM_012017.2
Entrez ID:Zfp346
Nearest Unigene:NM_001378934
Nearest Refseq:
Nearest Ensembl:
Gene Name:zinc finger protein 346
Gene Alias:
Gene Type:
CpG%:0.142857
GC%:0.640000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.