rfmm_124402.1

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Basic information about the TSS


TSS ID:rfmm_124402.1
Species:mouse
Chr:chr13
Start:55862438
End:55862455
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2440542,EM10E1007790)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF199558:0
MA435135:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000021959.11:8
  • NM_175150.3:8
  • BC062180:8
  • AK160051:41
  • AK167838:44
  • AK167977:44
  • AK079517:61
  • AK009878:82
  • AK167701:101
  • BC094275:172
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-17
Nearest PromoterID:NM_175150.3
Entrez ID:Txndc15
Nearest Unigene:NM_175150
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.058824
GC%:0.611111
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):