rfmm_1328.1

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Basic information about the TSS


TSS ID:rfmm_1328.1
Species:mouse
Chr:chr1
Start:40125252
End:40125254
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2269436,EM10E0934770)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001360800.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000194913.2:-107
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_001360800.1
Entrez ID:Il1r2
Nearest Unigene:XR_003952762
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):