rfmm_1374.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_1374.1
Species:mouse
Chr:chr1
Start:40468357
End:40468369
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF192635:360
MA428212:360
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000174335.8:361
  • NM_001294171.1:361
  • S78230:364
  • BC051445:396
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-330
Nearest PromoterID:XM_006495741.1
Entrez ID:Il1rl1
Nearest Unigene:NM_001025602
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.384615
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):