rfmm_1490.1

Basic information about the TSS

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TSS ID: rfmm_1490.1 Species: mouse Chr: chr1		Start: 42890414 End: 42890455 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2270061,EM10E0935004)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000185376.7:0 ENSMUST00000185523.7:0 ENSMUST00000188174.7:0 KY499669:0 AK049465:0 AK144656:0 AK150985:0 AK031497:0 BC116437:0 AK009082:0 GeneID: 69527 HGNC/MGI_ID: MGI:1916777 UniProt_ID: A0A1S6GWG5 Q3UMV5 Nearer transcript ids and distances: ENSMUST00000057208.13:-21 NM_023514.4:-21 AK214977:100 view more...

Gene_name: mitochondrial ribosomal protein S9 Gene_symbol: Mrps9 Gene_synonyms: 2310002A08Rik Gene_source: MGI:1916777

TATA-Box annotation

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Distance to TSS:	3
Nearest PromoterID:	XM_030242824.1
Entrez ID:	Mrps9
Nearest Unigene:	NM_023514
Nearest Refseq:
Nearest Ensembl:
Gene Name:	mitochondrial ribosomal protein S9
Gene Alias:
Gene Type:
CpG%:	0.048780
GC%:	0.595238
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.