rfmm_162815.1

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Basic information about the TSS


TSS ID:rfmm_162815.1
Species:mouse
Chr:chr19
Start:16412981
End:16412994
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1638875,EM10E0673274)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_008137.4:37
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000025602.4:132
  • AK085444:132
  • AK168498:382
  • AK160808:444
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-44
Nearest PromoterID:NM_008137.4
Entrez ID:Gna14
Nearest Unigene:XM_036161435
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.642857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):