rfmm_162964.1

Basic information about the TSS

TSS ID:	rfmm_162964.1
Species:	mouse
Chr:	chr19

Start:	20470115
End:	20470149
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2606556,EM10E1075072)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000225313.2:0 ENSMUST00000225249.2:0 AK018993:0
GeneID:	11668 320092
HGNC/MGI_ID:	MGI:1353450 MGI:2443348
UniProt_ID:	A0A286YCZ0
Nearer transcript ids and distances:	ENSMUST00000224358.2:-19 AK086826:-19 ENSMUST00000224807.2:-36 ENSMUST00000225337.3:-36 NR_015502.1:-36 AK087651:-36 NM_001361506.1:-168 NM_001361505.1:-168 NM_001361504.1:-168 NM_001361503.1:-168 view more...

Gene_name:	RIKEN cDNA E030003E18 gene; aldehyde dehydrogenase family 1, subfamily A1
Gene_symbol:	Aldh1a1 E030003E18Rik
Gene_synonyms:	ALDH1 Ahd-2 Ahd2 E1 Raldh1
Gene_source:	MGI:1353450 MGI:2443348

TATA-Box annotation

Distance to TSS:	53
Nearest PromoterID:	NR_015502.1
Entrez ID:	E030003E18Rik
Nearest Unigene:	NR_015502
Nearest Refseq:
Nearest Ensembl:
Gene Name:	RIKEN cDNA E030003E18 gene; aldehyde dehydrogenase family 1, subfamily A1
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.371429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.