rfmm_162971.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_162971.1
Species:mouse
Chr:chr19
Start:20704898
End:20704932
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2606661,EM10E1075102)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000025656.4:0
U96401:0
GeneID:26358
HGNC/MGI_ID:MGI:1347050
UniProt_ID:B2RTL5
Nearer transcript ids and distances:
  • BC032880:1
  • BC139412:1
  • BC139413:1
  • BC046315:4
view more...
Gene_name:aldehyde dehydrogenase family 1, subfamily A7
Gene_symbol:Aldh1a7
Gene_synonyms:Ahd2-like Aldh-pb
Gene_source:MGI:1347050



TATA-Box annotation


Distance to TSS:5
Nearest PromoterID:NM_011921.2
Entrez ID:Aldh1a7
Nearest Unigene:NM_011921
Nearest Refseq:
Nearest Ensembl:
Gene Name:aldehyde dehydrogenase family 1, subfamily A7
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.457143
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.