rfmm_162987.1

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Basic information about the TSS


TSS ID:rfmm_162987.1
Species:mouse
Chr:chr19
Start:21249215
End:21249254
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2606820,EM10E1075146)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF201704:0
MA437281:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK018054:370
  • ENSMUST00000237651.2:388
  • NM_009551.5:388
  • BC119124:388
  • BC119126:388
  • AK076397:388
  • AK131911:394
  • BC080270:406
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:84
Nearest PromoterID:XM_006527058.4
Entrez ID:Zfand5
Nearest Unigene:XM_006527058
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.128205
GC%:0.775000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):