rfmm_163024.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_163024.1
Species:mouse
Chr:chr19
Start:21630215
End:21630266
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2606961,EM10E1075213)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF201705:0
MA437282:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000235332.2:283
  • AK050879:283
  • NM_146096.3:407
  • AK017641:416
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-85
Nearest PromoterID:NM_025423.2
Entrez ID:1110059E24Rik
Nearest Unigene:NM_025423
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.098039
GC%:0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):