rfmm_163050.1

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Basic information about the TSS


TSS ID:rfmm_163050.1
Species:mouse
Chr:chr19
Start:21914662
End:21914676
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000060477.10:68
GeneID:
HGNC/MGI_ID:MGI:3645435
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:lactate dehydrogenase B, pseudogene
    Gene_symbol:Ldhb-ps
    Gene_synonyms:Gm5514
    Gene_source:MGI:3645435



    TATA-Box annotation


    Distance to TSS:22
    Nearest PromoterID:Ldhb-ps
    Entrez ID:Ldhb-ps
    Nearest Unigene:Ldhb-ps
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:lactate dehydrogenase B, pseudogene
    Gene Alias:
    Gene Type:NA
    CpG%:0.071429
    GC%:0.666667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.