rfmm_163171.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_163171.1
Species:mouse
Chr:chr19
Start:23736157
End:23736171
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2607607,EM10E1075434)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_177034.3:69
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000025830.9:80
  • AK147583:83
  • AK147623:121
  • BC141181:251
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-6
Nearest PromoterID:XM_006527139.5
Entrez ID:Apba1
Nearest Unigene:XM_006527139
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.214286
GC%:0.733333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):