rfmm_163417.1

Basic information about the TSS

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TSS ID: rfmm_163417.1 Species: mouse Chr: chr19		Start: 27988995 End: 27989034 Strand: -
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	pELS (EM10D2609019,EM10E1075990)
Category:	pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: LF201724:428 MA437301:428 GeneID: HGNC/MGI_ID: UniProt_ID: Nearer transcript ids and distances: ENSMUST00000173161.2:429 NM_001166414.2:429 NM_011265.3:429 AK041120:429 ENSMUST00000174850.8:455 BC017598:455 view more...

Gene_name: Gene_symbol: Gene_synonyms: Gene_source:

TATA-Box annotation

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Distance to TSS:	-448
Nearest PromoterID:	NM_011265.3
Entrez ID:	Rfx3
Nearest Unigene:	XM_011247169
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.102564
GC%:	0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):