rfmm_1872.1

Basic information about the TSS

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TSS ID: rfmm_1872.1 TSS ID(Version3): mm_5843.1 Species: mouse Chr: chr1		Start: 52992744 End: 52992797 Strand: -
Source datasets	FANTOM5|PRJDB10397|DRA000914
Protocol	CAGE|C1CAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	pELS (EM10D2271760,EM10E0935653)
Category:	pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: NM_001368279.1:0 GeneID: HGNC/MGI_ID: UniProt_ID: Nearer transcript ids and distances: ENSMUST00000114492.8:235 NM_001368280.1:235 view more...

Gene_name: Gene_symbol: Gene_synonyms: Gene_source:

TATA-Box annotation

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Distance to TSS:	3
Nearest PromoterID:	NM_001368279.1
Entrez ID:	1700019D03Rik
Nearest Unigene:	NM_001368281
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.018868
GC%:	0.481481
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):