rfmm_28005.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_28005.1
Species:mouse
Chr:chr3
Start:89134693
End:89134695
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2699303,EM10E1112873)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_030579.1:188
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000174324.2:298
  • ENSMUST00000174126.8:334
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-189
Nearest PromoterID:NR_030579.1
Entrez ID:Mir92b
Nearest Unigene:NR_030579
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.333333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):