rfmm_550.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_550.1
Species:mouse
Chr:chr1
Start:21067832
End:21067835
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF214392:183
MA449969:183
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK133634:-461
  • LF192581:-462
  • MA428158:-462
  • LF214391:500
  • MA449968:500
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-38393
Nearest PromoterID:XR_003947758.1
Entrez ID:Gm51618
Nearest Unigene:XR_003947758
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):