rfmm_561.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_561.1
Species:mouse
Chr:chr1
Start:21310806
End:21310812
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2265411,EM10E0933207)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_010356.4:0
NM_001288617.1:0
NM_001077353.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000027067.15:1
  • ENSMUST00000121676.8:19
  • AK014076:25
  • AK149543:34
  • ENSMUST00000124990.3:41
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_001077353.2
Entrez ID:Gsta3
Nearest Unigene:NM_001077353
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.142857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):