rfmm_923.1

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Basic information about the TSS


TSS ID:rfmm_923.1
Species:mouse
Chr:chr1
Start:34888776
End:34888801
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_175421.1:239
NM_145516.2:239
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000156687.8:256
  • AK148653:256
  • NM_001357425.1:269
  • BC057994:271
  • ENSMUST00000027297.11:272
  • AK039771:272
  • AK166091:272
  • AF189817:279
  • AK149868:280
  • AK150074:280
  • AK082118:287
  • AK179998:326
  • AK187330:326
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-252
Nearest PromoterID:NM_145516.2
Entrez ID:Plekhb2
Nearest Unigene:NM_175421
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.423077
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):