rfhg_56.1

Basic information about the TSS

TSS ID:	rfhg_56.1
Species:	human
Chr:	chr1

Start:	778805
End:	778855
Strand:	+

Source datasets

PRJNA4843412

Protocol

NETCAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2115324,EH38E1310158)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

nearest transcript id and distance:	ENST00000665867.1:0 ENST00000669749.1:0 ENST00000666217.1:0 ENST00000665719.1:0 ENST00000651411.1:0
GeneID:	105378580
HGNC/MGI_ID:	HGNC:50701
UniProt_ID:
nearer transcript ids and distances:	ENST00000656571.1:-3 ENST00000658648.1:-9 ENST00000457084.1:-23 ENST00000434264.6:-35 ENST00000429505.6:-45 ENST00000657896.1:-45 ENST00000670700.1:-47 ENST00000655765.1:-58 ENST00000412115.2:-58 ENST00000589899.5:75 ENST00000609830.1:82 ENST00000443772.2:117 view more...

Gene_name:	LOC100288069
Gene_symbol:	LINC01409
Gene_synonyms:
Gene_source:	HGNC:50701

TATA-Box annotation

Distance to TSS:	-142
Nearest PromoterID:	NR_033908
Entrez ID:	100288069
Nearest Unigene:	Hs.527521
Nearest Refseq:	NR_033908
Nearest Ensembl:
Gene Name:	LOC100288069
Gene Alias:	-
Gene Description:	uncharacterized LOC100288069
Gene Type:	ncRNA
CpG%:	0.060000
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.