TSS: Mm 170329.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 5: | Line 5: | ||
|Ulip= | |Ulip= | ||
|Ulip1= | |Ulip1= | ||
|all_trans=ENSMUST00000057110.10:19 ENSMUST00000175467.2:38 | |all_trans=ENSMUST00000057110.10:19 ENSMUST00000175467.2:38 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance= | |distance=-7 | ||
|distance_to_tss=-39536 | |distance_to_tss=-39536 | ||
|end=43477829 | |end=43477829 | ||
Line 14: | Line 14: | ||
|entrez_id=22240 | |entrez_id=22240 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=CRMP-4 | |gene_alias=CRMP-4{{!}}DRP-3{{!}}TUC4{{!}}ULIP-1{{!}}Ulip{{!}}Ulip1 | ||
|gene_description=dihydropyrimidinase-like 3 | |gene_description=dihydropyrimidinase-like 3 | ||
|gene_id= | |gene_id= | ||
Line 24: | Line 24: | ||
|nearest_refseq=NM_009468 | |nearest_refseq=NM_009468 | ||
|nearest_unigene=Mm.8180 | |nearest_unigene=Mm.8180 | ||
|num_trans= | |num_trans=2 | ||
|species=mouse | |species=mouse | ||
|start=43477814 | |start=43477814 | ||
|start_of_center_position=43477821 | |start_of_center_position=43477821 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=NM_001256055.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_170329.1 | |tss_id=mm_170329.1 |
Latest revision as of 12:12, 27 July 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -39536 |
---|---|
Nearest PromoterID: | NM_001291455 |
Entrez ID: | 22240 |
Nearest Unigene: | Mm.8180 |
Nearest Refseq: | NM_009468 |
Nearest Ensembl: | ENSMUSG00000024501 |
Gene Name: | Dpysl3 |
Gene Alias: | CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 |
Gene Description: | dihydropyrimidinase-like 3 |
Gene Type: | protein-coding |
CpG%: | 0.08 |
GC%: | 0.58209 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |