TSS: Mm 150340.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|P49= | |P49= | ||
|all_trans=NM_010501 | |all_trans=LF201744:388 MA437321:388 NM_010501:389 AK153226:389 ENSMUST00000102825.3:391 AK151032:391 BC089563:391 AK077459:391 LF257897:399 MA493474:399 L32974:414 BC003804:423 | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=388 | ||
|distance_to_tss=-391 | |distance_to_tss=-391 | ||
|end=34583140 | |end=34583140 | ||
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|entrez_id=15959 | |entrez_id=15959 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=Ifi49 | |gene_alias=Ifi49{{!}}P49 | ||
|gene_description=interferon-induced protein with tetratricopeptide repeats 3 | |gene_description=interferon-induced protein with tetratricopeptide repeats 3 | ||
|gene_id=15959 | |gene_id=15959 | ||
|gene_name= | |gene_name=Ifit3 | ||
|gene_source=MGI:1101055 | |gene_source=MGI:1101055 | ||
|gene_symbol=Ifit3 | |gene_symbol=Ifit3 | ||
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|nearest_refseq=NM_010501 | |nearest_refseq=NM_010501 | ||
|nearest_unigene=Mm.426079 | |nearest_unigene=Mm.426079 | ||
|num_trans= | |num_trans=12 | ||
|species=mouse | |species=mouse | ||
|start=34583136 | |start=34583136 | ||
|start_of_center_position=34583138 | |start_of_center_position=34583138 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=LF201744 MA437321 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_150340.1 | |tss_id=mm_150340.1 | ||
Latest revision as of 11:43, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -391 |
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| Nearest PromoterID: | NM_010501 |
| Entrez ID: | 15959 |
| Nearest Unigene: | Mm.426079 |
| Nearest Refseq: | NM_010501 |
| Nearest Ensembl: | ENSMUSG00000074896 |
| Gene Name: | Ifit3 |
| Gene Alias: | Ifi49|P49 |
| Gene Description: | interferon-induced protein with tetratricopeptide repeats 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.