TSS: Hg 100703.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-10182 |entrez_id=100616456 |gc_percent=0.552239 |gene_alias=mir-4476 |gene_description=microRNA 4476 |gene_name=MIR4476 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=-10182 | |distance_to_tss=-10182 | ||
|end=36903717 | |||
|end_of_center_position=36903713 | |||
|entrez_id=100616456 | |entrez_id=100616456 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_039687 | |nearest_refseq=NR_039687 | ||
|nearest_unigene= | |nearest_unigene= | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=36903708 | |||
|start_of_center_position=36903712 | |||
|strand=- | |||
|tata_box=-44(CCCCTGAAAAGC,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100703.1 | |tss_id=hg_100703.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:26, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -10182 |
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| Nearest PromoterID: | NR_039687 |
| Entrez ID: | 100616456 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039687 |
| Nearest Ensembl: | ENSG00000265368 |
| Gene Name: | MIR4476 |
| Gene Alias: | mir-4476 |
| Gene Description: | microRNA 4476 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -44(CCCCTGAAAAGC,-,0.00) |