TSS: Hg 100704.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-10193 |entrez_id=100616456 |gc_percent=0.567164 |gene_alias=mir-4476 |gene_description=microRNA 4476 |gene_name=MIR4476 |gene_t...") |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=-10193 | |distance_to_tss=-10193 | ||
|end=36903730 | |||
|end_of_center_position=36903725 | |||
|entrez_id=100616456 | |entrez_id=100616456 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_039687 | |nearest_refseq=NR_039687 | ||
|nearest_unigene= | |nearest_unigene= | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=36903718 | |||
|start_of_center_position=36903724 | |||
|strand=- | |||
|tata_box=-33(CCCCTGAAAAGC,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100704.1 | |tss_id=hg_100704.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:26, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -10193 |
|---|---|
| Nearest PromoterID: | NR_039687 |
| Entrez ID: | 100616456 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039687 |
| Nearest Ensembl: | ENSG00000265368 |
| Gene Name: | MIR4476 |
| Gene Alias: | mir-4476 |
| Gene Description: | microRNA 4476 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CCCCTGAAAAGC,-,0.00) |