TSS: Hg 236386.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000339953.9:-38 uc002fct.4:-38 AY358373:-38 ENST00000620745.1:-50 uc059xbu.1:-50 ENST00000425714.2:-116 NM_001011880:-116 uc059xbw.1:-116 AK293982:-116 ENST00000617101.4:-402 uc059xbs.1:-402 | |all_trans=ENST00000339953.9:-38 uc002fct.4:-38 AY358373:-38 ENST00000620745.1:-50 uc059xbu.1:-50 ENST00000425714.2:-116 NM_001011880:-116 uc059xbw.1:-116 AK293982:-116 ENST00000617101.4:-402 uc059xbs.1:-402 | ||
|chr= | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=NA | ||
|distance_to_tss=116 | |distance_to_tss=116 | ||
|end= | |end=16061786 | ||
|end_of_center_position=16061786 | |end_of_center_position=16061786 | ||
|entrez_id=497190 | |entrez_id=497190 | ||
| Line 12: | Line 12: | ||
|gene_description=C-type lectin domain family 18 member B | |gene_description=C-type lectin domain family 18 member B | ||
|gene_id=497190 | |gene_id=497190 | ||
|gene_name= | |gene_name=CLEC18B | ||
|gene_source=HGNC:33849 | |gene_source=HGNC:33849 | ||
|gene_symbol=CLEC18B | |gene_symbol=CLEC18B | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001011880 | |nearest_refseq=NM_001011880 | ||
|nearest_unigene=Hs.454670 | |nearest_unigene=Hs.454670 | ||
|num_trans= | |num_trans=0 | ||
|species=human | |species=human | ||
|start= | |start=16061784 | ||
|start_of_center_position=16061785 | |start_of_center_position=16061785 | ||
|strand= | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
|tss_classification= | |tss_classification=no | ||
|tss_id=hg_236386.1 | |tss_id=hg_236386.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q6UXF7 | |uniprot_id=Q6UXF7 | ||
}} | }} | ||
Latest revision as of 10:08, 14 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 116 |
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| Nearest PromoterID: | NM_001011880 |
| Entrez ID: | 497190 |
| Nearest Unigene: | Hs.454670 |
| Nearest Refseq: | NM_001011880 |
| Nearest Ensembl: | ENSG00000140839 |
| Gene Name: | CLEC18B |
| Gene Alias: | MRCL2 |
| Gene Description: | C-type lectin domain family 18 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.